Module protkit.seq.antibody_sequence

Implements class AntibodySequence to represent an antibody sequence.

Expand source code 
#!/usr/bin/env python3
# -*- coding:utf-8 -*-
# Authors:  Fred Senekal (FS)
# Contact:  fred@silicogenesis.com
# License:  GPLv3

"""
Implements class `AntibodySequence` to represent an antibody sequence.
"""

from typing import Optional, List, Union
from protkit.seq.protein_sequence import ProteinSequence


class AntibodySequence(ProteinSequence):
    def __init__(self,
                 sequence: Union[str, List[str]],
                 description: Optional[str] = None,
                 chain_id: Optional[str] = None
                 ):
        """
        Constructor.

        Args:
            sequence (Union[str, List[str]]): The sequence of residue names.
            description (Optional[str]): Optional description associated with the sequence.
            chain_id (Optional[str]): Optional chain ID associated with the sequence.

        Returns:
            None
        """
        super().__init__(sequence, description, chain_id)

Classes

class AntibodySequence (sequence: Union[str, List[str]], description: Optional[str] = None, chain_id: Optional[str] = None)

Constructor.

Args

sequence : Union[str, List[str]]
The sequence of residue names.
description : Optional[str]
Optional description associated with the sequence.
chain_id : Optional[str]
Optional chain ID associated with the sequence.

Returns

None

Expand source code 
class AntibodySequence(ProteinSequence):
    def __init__(self,
                 sequence: Union[str, List[str]],
                 description: Optional[str] = None,
                 chain_id: Optional[str] = None
                 ):
        """
        Constructor.

        Args:
            sequence (Union[str, List[str]]): The sequence of residue names.
            description (Optional[str]): Optional description associated with the sequence.
            chain_id (Optional[str]): Optional chain ID associated with the sequence.

        Returns:
            None
        """
        super().__init__(sequence, description, chain_id)

Ancestors

Inherited members